Lemon Zucchini Cupcakes

The Ultimate Guide to Baking Moist Lemon Zucchini Cupcakes with Cream Cheese Frosting

As the warm embrace of summer reaches its peak, gardens and local markets are overflowing with an abundance of fresh zucchini. If you find yourself with an excess of this versatile squash and are searching for creative ways to enjoy it beyond savory dishes, look no further! These incredibly moist and flavorful Lemon Zucchini Cupcakes are the quintessential summer dessert. They offer a delightful blend of bright citrus notes and the subtle earthiness of zucchini, all crowned with a luscious, tangy lemon cream cheese frosting. It’s a perfect treat for picnics, potlucks, or simply an afternoon indulgence.

A lemon zucchini cupcake with lemon cream cheese frosting and a lemon slice on top.

I have always been a fan of classic zucchini bread and cakes, but this lemon zucchini cupcake recipe truly elevates the experience with a fresh, vibrant twist. It features an incredibly moist zucchini-infused cake base, perfectly complemented by a bright, zesty, and utterly luscious lemon cream cheese buttercream. This combination makes it one of the absolute best zucchini recipes you’ll ever try, transforming humble garden zucchini into an irresistible dessert.

If you’re looking to enjoy these delightful flavors for a morning treat or a special brunch, be sure to also try my easy lemon zucchini muffins! They offer a similar flavor profile in a more casual, breakfast-friendly format.

Why You’ll Adore These Lemon Zucchini Cupcakes

These lemon zucchini cupcakes aren’t just another dessert; they’re a celebration of summer flavors and simple baking. Here’s why this particular recipe stands out and quickly becomes a household favorite:

  • Effortless Preparation: This exceptional recipe can be whipped up in just six incredibly simple steps, making it accessible even for novice bakers. You don’t need complicated techniques or specialized equipment to achieve bakery-quality results.
  • A Zesty Twist on Tradition: While classic spiced zucchini bread is comforting, the bright and tangy lemon zest paired with zucchini creates a wonderfully refreshing departure from the usual. It’s a sophisticated flavor profile that truly highlights the best of summer.
  • Unrivaled Moisture and Color: Zucchini is a secret weapon in baking, known for adding incredible moisture without making baked goods greasy. It also contributes a subtle green hue, enhancing the visual appeal of these cupcakes. Rest assured, the zucchini’s flavor is practically undetectable, allowing the lemon to shine while ensuring every bite is wonderfully tender. It’s truly the most delicious way to sneak in some veggies!
  • Perfectly Balanced Flavors: The crowning glory of these cupcakes is the bright lemon cream cheese buttercream frosting. Its delightful tanginess perfectly cuts through the sweetness of the cupcakes, creating a harmonious and addictive flavor experience that will have everyone reaching for a second.
  • Ideal for Zucchini Surplus: If your garden is overflowing with zucchini, or you simply picked up a few too many at the farmer’s market, this recipe is a fantastic way to utilize them before they go to waste.

Essential Ingredients for Perfect Lemon Zucchini Cupcakes

Crafting these delectable lemon zucchini cupcakes requires a thoughtful selection of ingredients. Each component plays a crucial role in achieving the desired texture, moisture, and vibrant flavor. Below, we’ll dive into the key ingredients and offer tips for best results.

Ingredients needed to make lemon zucchini cupcakes with cream cheese frosting.
  • Zucchini: These long, green veggies are undoubtedly the star of this recipe. They contribute an incredible amount of moisture and a beautiful, subtle color to these cupcakes. You can use any size zucchini you have on hand, though larger ones are generally easier to grate. Remember to lightly pat out excess moisture after grating to prevent the batter from becoming too wet.
  • Granulated Sugar & Light Brown Sugar: The combination of these two sugars creates a balanced sweetness and contributes to the moist texture. Brown sugar adds a touch of molasses flavor and additional moisture.
  • Canola Oil (or Vegetable Oil): Oil is crucial for achieving an exceptionally moist and tender crumb. Unlike butter, which can make cakes denser, oil keeps the cupcakes light and fluffy.
  • Lemon Zest: The hero of the flavor profile! Lemon zest provides that bright, aromatic, and tangy citrus kick that makes these cupcakes so refreshing. Be generous with it!
  • Large Egg: Acts as a binder and helps provide structure and richness to the cupcakes. Ensure it’s at room temperature for better emulsification with other ingredients.
  • Vanilla Extract: A touch of vanilla complements the lemon beautifully, adding depth and warmth to the overall flavor.
  • Sour Cream: This ingredient is another secret to super moist cupcakes. The acidity in sour cream reacts with the baking soda, promoting a tender crumb, and its fat content adds richness. Make sure to use full-fat sour cream, and ensure it’s at room temperature for smooth mixing.
  • All-Purpose Flour: The primary structural component. Sifting it with the leavening agents helps ensure an even distribution and prevents lumps.
  • Baking Soda & Baking Powder: These leavening agents work in tandem to give the cupcakes their rise and airy texture.
  • Ground Cardamom: A unique spice that pairs wonderfully with lemon and adds a subtle, fragrant, almost floral note, elevating these from ordinary to extraordinary.
  • Salt: Essential for balancing the sweetness and enhancing all the other flavors in the cupcakes.
  • Cream Cheese: For the frosting, always use full-fat cream cheese. Reduced-fat or Neufchâtel cheese will result in a runnier, less fluffy cream cheese frosting. Ensure it’s at room temperature for a smooth, lump-free consistency.
  • Unsalted Butter: The other key component of the rich, creamy frosting. Also needs to be at room temperature.
  • Powdered Sugar (Confectioners’ Sugar): Provides sweetness and structure to the frosting. Sifting it is crucial to avoid a lumpy frosting.

See the recipe card below for a full list of precise ingredients and measurements.

Exciting Substitutions & Creative Variations

While this recipe is perfect as written, feel free to get creative and customize these lemon zucchini cupcakes to suit your taste or what you have on hand. Here are some ideas to inspire you:

  • Lime Zucchini Cupcakes: For a refreshing tropical twist, substitute the lemon zest with lime zest in both the cupcake batter and the cream cheese frosting. The vibrant, tart flavor of lime will beautifully complement the zucchini, creating a whole new experience.
  • Add Nuts for Crunch: If you enjoy the texture of nuts in your zucchini bread, consider folding in ½ cup of toasted, chopped pecans or walnuts into the batter just before baking. This adds a delightful crunch and nutty flavor that complements the soft cake.
  • Mini or Jumbo Cupcakes: Easily adjust the size of your cupcakes by swapping out your standard muffin tin. For mini cupcakes, reduce the baking time by about 5-8 minutes. For jumbo cupcakes, increase the baking time by 5-10 minutes, always checking for doneness with a toothpick.
  • Spiced Zucchini Cupcakes: If you prefer a more traditional spiced flavor, you can reduce the lemon zest slightly and add a pinch of cinnamon or nutmeg (about ½ teaspoon each) to the dry ingredients for a warm, comforting profile.
  • Glaze Instead of Frosting: For a lighter dessert, skip the cream cheese frosting and instead make a simple lemon glaze by whisking powdered sugar with fresh lemon juice until smooth. Drizzle over cooled cupcakes.
  • White Chocolate Chips: Fold in ½ cup of white chocolate chips into the batter along with the zucchini for an added layer of sweetness and a rich, creamy texture.

This recipe has been carefully tested with the specified ingredients. If you decide to replace or add any ingredients beyond these suggestions, please let us know how it turned out in the comments below! Your feedback helps us and other bakers.

Easy Step-by-Step Instructions to Bake Your Cupcakes

Baking these delightful lemon zucchini cupcakes is a straightforward process when you follow these simple steps. Precision in baking often yields the best results, so take your time and enjoy each stage of creating this wonderful dessert.

Whisking sugars, canola oil, lemon zest, vanilla extract and sour cream in a bowl.

Step 1: Prepare Your Wet Ingredients. In a spacious mixing bowl, combine the granulated sugar, light brown sugar, and either canola or vegetable oil. Whisk these ingredients together until they are well integrated and the mixture is smooth. Next, stir in the lemon zest, ensuring its aromatic oils are released into the mixture. Follow with the room temperature egg, vanilla extract, and sour cream. Continue stirring until all the wet ingredients are thoroughly combined and the mixture is uniform. This careful initial mixing sets the foundation for a perfectly moist cupcake.

Whisking dry ingredients into wet ingredients.

Step 2: Incorporate Dry Ingredients. In a separate bowl (or directly into the wet ingredients using a sifter), sift together the all-purpose flour, baking soda, baking powder, ground cardamom, and salt. Sifting is crucial here to prevent lumps and ensure these leavening agents and spices are evenly distributed, contributing to a uniform rise and flavor. Gently fold or stir the sifted dry ingredients into the wet mixture until *just* combined. Be careful not to overmix; a few streaks of flour are perfectly fine and will disappear when you add the zucchini. Overmixing can lead to tough cupcakes.

Folding grated zucchini into lemon cupcake batter.

Step 3: Add the Zucchini. Once your dry ingredients are mostly incorporated, it’s time for the star vegetable. Gently fold in the grated zucchini until it is evenly distributed throughout the batter. This step should be quick and gentle to avoid overmixing. The zucchini will add essential moisture, contributing to the incredibly tender and flavorful outcome of your cupcakes.

Scooping cupcake batter into cupcake liners.

Step 4: Bake to Golden Perfection. Prepare your cupcake pan by lining it with paper liners. Using a cookie scoop or a spoon, fill each cupcake liner approximately halfway with the batter. This ensures they bake evenly and don’t overflow. Transfer the pan to your preheated oven and bake for 18-22 minutes, or until the tops are lightly browned and a wooden toothpick inserted into the center of a cupcake comes out clean. Once baked, remove the cupcakes from the oven and let them cool in the pan for a few minutes before carefully transferring them to a wire rack to cool completely. Cooling thoroughly is essential before frosting to prevent the frosting from melting.

Lemon cream cheese frosting mixed in a bowl.

Step 5: Prepare the Lemon Cream Cheese Frosting. In a medium bowl, ideally using an electric mixer with a paddle attachment (or a hand mixer), combine your room temperature cream cheese, unsalted butter, additional lemon zest, and sifted powdered sugar. Beat these ingredients together on medium speed until the frosting is light, fluffy, and perfectly smooth. This may take a few minutes. Scrape down the sides of the bowl as needed to ensure everything is incorporated. Once ready, transfer the delightful frosting to a piping bag fitted with your favorite piping tip (a large closed-star tip works beautifully for a classic look).

Piping lemon cream cheese frosting onto a lemon zucchini cupcake using a closed star tip.

Step 6: Frost and Serve! Once your cupcakes are completely cooled to room temperature, pipe the delicious lemon cream cheese frosting generously onto the top of each cupcake. You can swirl it on with an offset spatula for a rustic look, or use a piping bag and tip for a more elegant finish. Garnish with a thin slice of fresh lemon or a sprinkle of extra lemon zest for a beautiful presentation. Serve immediately and enjoy the bright, moist, and utterly irresistible flavors of these homemade lemon zucchini cupcakes!

Baking Secrets: Expert Tips for Success

Achieving bakery-quality cupcakes at home is easy with a few insider tips. Pay attention to these details, and your lemon zucchini cupcakes will turn out perfectly every time:

  • Tip #1 – Room Temperature Ingredients are Key for Frosting: This cannot be stressed enough! It is absolutely crucial for your cream cheese and butter to be at true room temperature. If they are too cold, your frosting will be lumpy and difficult to spread smoothly. If you’re short on time, remove any foil or packaging and microwave them in 10-second bursts until soft to the touch but not melted. This ensures a smooth, emulsified, and airy frosting.
  • Tip #2 – The Trifecta of Moisture in Cupcakes: There are three essential ingredients in this zucchini cupcake recipe that work in harmony to guarantee incredibly moist and fluffy results: shredded zucchini, sour cream, and oil. Do not skimp on the fat in the sour cream – use full-fat for the best texture. And importantly, resist the urge to swap out the oil for butter in the cupcake batter, as oil contributes to a lighter, more consistent moisture that butter can’t quite replicate in this particular recipe.
  • Tip #3 – Boost That Lemony Flavor: For an extra burst of vibrant lemon flavor in your cupcakes, try this trick: before adding the rest of the wet ingredients in Step 1, mix the lemon zest directly into the granulated sugar with your fingers. Gently rub them together for about a minute. This process helps to release the natural oils from the lemon zest, infusing the sugar with intense citrus aroma and flavor that will permeate your entire cupcake.
  • Tip #4 – Don’t Overmix the Batter: Once you’ve added the dry ingredients, mix only until just combined. Overmixing develops the gluten in the flour, leading to tough, chewy cupcakes rather than light and tender ones. A few streaks of flour are acceptable before adding the zucchini.
  • Tip #5 – Pat Your Zucchini Dry: Zucchini contains a lot of water. After grating, gently pat the shredded zucchini with paper towels to remove some of the excess moisture. This prevents your batter from becoming too watery and ensures the perfect cupcake consistency.

Frequently Asked Questions About Lemon Zucchini Cupcakes

Have questions about baking with zucchini or these specific lemon zucchini cupcakes? Here are answers to some common queries to help you on your baking journey.

What’s the difference between a zucchini and a cucumber? Can I substitute them?

While both zucchini and cucumbers are long, dark green, and cylindrical, they are quite different and cannot be substituted for each other in this recipe. Cucumbers generally have a thicker, sometimes bitter skin and are very watery inside with a distinct fresh flavor often used in salads. Zucchini, on the other hand, is a summer squash with a tender skin (no need to peel!) and a milder flavor, making it ideal for baking where it adds moisture without overpowering the taste. Using a cucumber in place of zucchini would likely lead to a very watery batter and a different, less desirable flavor profile.

Should I peel the zucchini before grating for cupcakes?

No, there is absolutely no need to peel the zucchini before grating it for these cupcakes. The skin is fully edible, very tender once baked, and actually adds a beautiful, subtle green fleck and extra nutrients to the finished product. Just make sure to thoroughly wash the zucchini beforehand, especially since you will be consuming the skin.

What do these lemon zucchini cupcakes taste like? Will they taste “vegetable-y”?

You might be surprised to hear that you won’t really taste the zucchini at all! The zucchini’s primary role is to provide incredible moisture and a tender crumb, acting as a silent hero in the texture department. The dominant flavor in these cupcakes is bright, zesty lemon, beautifully complemented by the subtle spices and the creamy, tangy lemon cream cheese frosting. Many people describe the flavor as reminiscent of cheerful, citrusy breakfast cereals like Froot Loops – in the best way possible! It’s a sweet, refreshing, and utterly delicious treat.

Can I use frozen zucchini?

Yes, you can use frozen shredded zucchini in a pinch. However, frozen zucchini holds significantly more water. You’ll need to thaw it completely and then squeeze out as much excess liquid as possible using a clean kitchen towel or paper towels. The drier the zucchini, the better the cupcake texture will be. If you don’t remove enough water, your cupcakes might turn out dense or gummy.

Why are my cupcakes dense or dry?

Dense cupcakes are usually a sign of overmixing the batter, which develops the gluten too much. Dry cupcakes can result from overbaking or not having enough moisture in the batter. Ensure you mix only until just combined, a few streaks of flour are fine. Also, double-check your oven temperature with an oven thermometer and bake only until a toothpick comes out clean. Using room temperature ingredients and patting your zucchini dry (but not *too* dry, as it still provides moisture) are also important factors.

A lemon zucchini cupcake with a bite taken out of it.

Storage Solutions for Freshness

Proper storage ensures your delicious lemon zucchini cupcakes remain fresh and moist for as long as possible. Here’s how to store them, whether frosted or unfrosted:

  • Room Temperature: Frosted cupcakes, due to their cream cheese frosting, can be stored at room temperature for up to 1 day in an airtight container. If they are unfrosted, the cupcakes themselves will keep well at room temperature for up to 5 days, also in an airtight container.
  • Refrigerator: To extend the life of your frosted cupcakes, store them in an airtight container in the refrigerator for up to 1 week. The cool temperature helps maintain the frosting’s integrity and freshness.
  • Freezing Instructions: These cupcakes freeze wonderfully! Wrap unfrosted cupcakes individually in plastic wrap and then place them in a freezer-safe bag or airtight container for up to 1 month. You can also carefully freeze frosted cupcakes; flash freeze them on a baking sheet until the frosting is solid, then wrap them individually and store. Thaw at room temperature or in the refrigerator before serving. If frozen frosted, let them thaw slightly in the fridge and then bring to room temperature before enjoying for best texture.

More Delicious Recipes You’ll Love

If you enjoyed these lemon zucchini cupcakes, you’ll definitely want to explore more delightful baking creations. Here are a few recommendations from our kitchen:

  • Easy & Moist Lemon Zucchini Muffins
  • The Best Carrot Cake Cupcakes
  • Simple Honey Vanilla Layer Cake
  • The Best Lemon Raspberry Muffins

Did you try this recipe? I’d love to see it! Tag @brokenovenbaking on Instagram & Facebook and leave a ⭐️ review below!

📖 Full Recipe Card: Lemon Zucchini Cupcakes

Lemon zucchini cupcakes with lemon cream cheese frosting.

Lemon Zucchini Cupcakes

Kayla Burton

These delightful cupcakes are bursting with fresh lemon zest and hidden zucchini, crowned with a rich and tangy lemon cream cheese frosting! They are the ultimate easy and delicious summer dessert.
5 from 2 votes
Print Recipe
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Prep Time
20 minutes
Cook Time
20 minutes
Total Time
40 minutes

Course Dessert
Cuisine American

Servings 12 cupcakes
Calories 373 kcal

Equipment

  • Cupcake pan
  • Cupcake liners
  • Measuring spoons
  • Scale or measuring cups
  • Mixing bowls
  • Whisk
  • Spatula
  • Scoop
  • Cooling rack
  • Hand mixer (recommended)
  • Piping bag & tip (for frosting – optional)
Kayla’s Top TipWeigh dry ingredients in grams (g) with a food scale for best results!

Ingredients

For the Lemon Zucchini Cupcakes

  • ¼ cup (50 g) granulated sugar
  • ½ cup (100 g) light brown sugar, packed
  • ½ cup (118.29 ml) canola oil (or vegetable oil)
  • 2 teaspoons lemon zest, lightly packed (from 1-2 medium lemons)
  • 1 large egg, room temperature
  • ½ teaspoon vanilla extract
  • ¼ cup (60 g) sour cream, room temperature (full-fat recommended)
  • 1½ cups (187 g) all-purpose flour, sifted
  • ½ teaspoon baking soda
  • ½ teaspoon baking powder
  • ½ teaspoon ground cardamom
  • ¼ teaspoon salt
  • ⅔ cup (slightly less than 1 medium) shredded zucchini, moisture lightly patted out

For the Lemon Cream Cheese Frosting

  • 4 ounces (113.4 g) cream cheese, room temperature (full-fat)
  • ¼ cup (56.75 g) unsalted butter, room temperature
  • 2½ cups (300 g) powdered sugar, sifted
  • 1 teaspoon lemon zest

Instructions

Lemon Zucchini Cupcakes

  1. Preheat your oven to 350°F (175°C). Line a 12-cup cupcake pan with paper liners.
  2. Grate the zucchini using a box grater or food processor. Once grated, spread it out on a few layers of paper towels and gently pat out any excess moisture. This step is important to prevent overly wet cupcakes.
  3. In a large mixing bowl, whisk together the granulated sugar, light brown sugar, and canola oil until smooth. Stir in the lemon zest (rubbing it into the sugar first can enhance flavor), egg, vanilla extract, and room temperature sour cream until well combined.
  4. In a separate bowl, whisk together the all-purpose flour, baking soda, baking powder, ground cardamom, and salt. Sift these dry ingredients into the wet mixture. Gently whisk until just combined; be careful not to overmix, as this can lead to tough cupcakes. A few flour streaks are acceptable at this stage.
  5. Add the prepared shredded zucchini to the batter. Gently fold it in with a spatula until everything is evenly incorporated. Mix minimally to keep the cupcakes tender.
  6. Divide the batter evenly among the prepared cupcake liners, filling each about halfway. Bake for 18-22 minutes, or until the tops are lightly golden and a toothpick inserted into the center of a cupcake comes out clean.
  7. Allow the cupcakes to cool in the pan for about 5 minutes before carefully transferring them to a wire cooling rack to cool completely. They must be entirely cool before frosting.

Lemon Cream Cheese Frosting

  1. In a medium bowl, using an electric mixer or stand mixer with a paddle attachment, beat the room temperature cream cheese, unsalted butter, sifted powdered sugar, and lemon zest together until the frosting is light, fluffy, and completely smooth. Be sure to scrape down the sides of the bowl as needed.
  2. Transfer the finished frosting to a piping bag fitted with your desired piping tip (a large closed-star tip creates a beautiful swirl). Once the cupcakes are fully cooled, pipe the luscious frosting generously onto the top of each. Garnish with a fresh lemon slice or a sprinkle of extra zest if desired, then serve and enjoy!

Notes

Store frosted cupcakes at room temperature for 1 day, in an airtight container in the refrigerator for up to 1 week, or in the freezer for up to 1 month. Unfrosted cupcakes can be stored at room temperature for about 5 days. If freezing frosted cupcakes, flash freeze them first until the frosting is solid before wrapping. Always allow refrigerated or frozen frosted cupcakes to come to room temperature for the best eating experience.

The provided nutrition information is an estimate per serving and is not guaranteed for accuracy due to potential variations in ingredients and preparation.

Calories: 373kcal
Carbohydrates: 51g
Protein: 3g
Fat: 18g
Saturated Fat: 6g
Polyunsaturated Fat: 3g
Monounsaturated Fat: 8g
Trans Fat: 1g
Cholesterol: 38mg
Sodium: 154mg
Potassium: 91mg
Fiber: 1g
Sugar: 38g
Vitamin A: 324IU
Vitamin C: 3mg
Calcium: 41mg
Iron: 1mg

The provided nutritional information is an estimate per serving. Accuracy is not guaranteed.

Tried this recipe?Leave a comment below & tag @brokenovenbaking on social!